Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm8009-201ENSMUST00000191672 436 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm9227-201ENSMUST00000194733 566 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm43561-201ENSMUST00000199866 448 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm2040-201ENSMUST00000202979 289 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44239-201ENSMUST00000204228 271 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm7692-201ENSMUST00000213534 409 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm3800-201ENSMUST00000221086 554 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm7045-201ENSMUST00000221466 605 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 AV026068-216ENSMUST00000223874 328 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm25415-201ENSMUST00000104220 132 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm25795-201ENSMUST00000104421 132 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm15399-201ENSMUST00000118055 724 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm12099-201ENSMUST00000118660 750 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm23032-201ENSMUST00000157995 107 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm22534-201ENSMUST00000158173 104 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm22530-201ENSMUST00000158820 118 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm27006-201ENSMUST00000182218 943 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm37193-201ENSMUST00000193087 513 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm33354-201ENSMUST00000195448 906 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm43892-201ENSMUST00000204373 265 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44060-201ENSMUST00000204440 410 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm45366-201ENSMUST00000209828 384 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm46146-201ENSMUST00000217483 346 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 AC116589.7-201ENSMUST00000221061 239 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 AC164117.1-201ENSMUST00000221726 239 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 AC154506.1-201ENSMUST00000225178 621 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 AC154328.1-201ENSMUST00000225875 307 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sh3rf1Q69ZI1 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.06□□□□□ -1.44
Sh3rf1Q69ZI1 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms