Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm23816-201ENSMUST00000179617 132 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Mir6408-201ENSMUST00000183643 91 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm27805-201ENSMUST00000184513 79 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm18016-201ENSMUST00000216119 801 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm12719-201ENSMUST00000118859 241 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm12486-201ENSMUST00000120887 541 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm23168-201ENSMUST00000157156 143 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm26347-201ENSMUST00000157526 131 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm23964-201ENSMUST00000157966 107 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm43044-201ENSMUST00000198091 379 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm17779-201ENSMUST00000213395 394 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Snora64-201ENSMUST00000104521 134 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm13092-201ENSMUST00000136346 260 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm24369-201ENSMUST00000175387 96 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm44054-201ENSMUST00000203814 372 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm8911-201ENSMUST00000213986 652 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm25420-201ENSMUST00000104216 127 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm37682-201ENSMUST00000191776 522 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm37881-201ENSMUST00000193001 421 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm43828-201ENSMUST00000196890 639 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm4501-201ENSMUST00000207330 551 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm4558-201ENSMUST00000207886 521 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm45499-201ENSMUST00000211656 280 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.22□□□□□ -1.57
Ccdc88aQ5SNZ0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.21□□□□□ -1.57
Ccdc88aQ5SNZ0 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm15364-201ENSMUST00000119618 585 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm12340-201ENSMUST00000121617 462 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm5258-201ENSMUST00000165437 327 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm25999-201ENSMUST00000175398 133 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm272-201ENSMUST00000222073 919 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms