Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1bP97952 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1bP97952 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1bP97952 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1bP97952 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1bP97952 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1bP97952 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1bP97952 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.52□□□□□ -1.69
Scn1bP97952 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.52□□□□□ -1.69
Scn1bP97952 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.52□□□□□ -1.69
Scn1bP97952 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm23193-201ENSMUST00000102427 82 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm22543-201ENSMUST00000104347 94 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm14909-201ENSMUST00000117853 351 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm22210-201ENSMUST00000158101 144 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Mir6244-201ENSMUST00000184156 117 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm29610-201ENSMUST00000187749 453 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm28116-201ENSMUST00000189064 387 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm37203-201ENSMUST00000191618 385 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm9173-201ENSMUST00000198054 400 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm42652-201ENSMUST00000199073 614 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm43136-201ENSMUST00000200403 636 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm43456-201ENSMUST00000202519 457 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm44879-201ENSMUST00000207007 503 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm18541-201ENSMUST00000215935 538 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm18704-201ENSMUST00000219736 446 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Zfp429-203ENSMUST00000224684 524 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm25260-201ENSMUST00000083053 134 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Mir504-201ENSMUST00000093602 79 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Scn1bP97952 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Scn1bP97952 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1bP97952 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.51□□□□□ -1.69
Scn1bP97952 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Scn1bP97952 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Scn1bP97952 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Scn1bP97952 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn1bP97952 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Scn1bP97952 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Scn1bP97952 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm22266-201ENSMUST00000104011 138 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm15018-201ENSMUST00000117090 633 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm12757-201ENSMUST00000119465 800 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm12267-201ENSMUST00000121609 761 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm15959-201ENSMUST00000121724 368 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm25152-201ENSMUST00000157117 114 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm22601-201ENSMUST00000157595 250 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm26489-201ENSMUST00000157880 264 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm24734-201ENSMUST00000158860 262 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm24111-201ENSMUST00000175491 97 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm29105-201ENSMUST00000187256 450 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Scn1bP97952 Gm2147-201ENSMUST00000193588 639 ntBASIC4.5□□□□□ -1.69
Scn1bP97952 Gm3933-201ENSMUST00000195391 439 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms