Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.09□□□□□ -1.59
Col2a1P28481 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col2a1P28481 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col2a1P28481 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.09□□□□□ -1.6
Col2a1P28481 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col2a1P28481 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.09□□□□□ -1.6
Col2a1P28481 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col2a1P28481 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col2a1P28481 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Col2a1P28481 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.09□□□□□ -1.6
Col2a1P28481 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col2a1P28481 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col2a1P28481 Gm24788-201ENSMUST00000104283 156 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col2a1P28481 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Gm15057-201ENSMUST00000121516 534 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.08□□□□□ -1.6
Col2a1P28481 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.08□□□□□ -1.6
Col2a1P28481 Gm25748-201ENSMUST00000175487 70 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Mir5134-201ENSMUST00000175529 78 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Mir6537-201ENSMUST00000184150 110 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Gm37097-201ENSMUST00000193676 336 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.08□□□□□ -1.6
Col2a1P28481 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col2a1P28481 Gm44946-201ENSMUST00000208425 572 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.08□□□□□ -1.6
Col2a1P28481 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col2a1P28481 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col2a1P28481 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col2a1P28481 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col2a1P28481 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col2a1P28481 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col2a1P28481 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.08□□□□□ -1.6
Col2a1P28481 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Col2a1P28481 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.08□□□□□ -1.6
Col2a1P28481 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.08□□□□□ -1.6
Col2a1P28481 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm5942-201ENSMUST00000120046 439 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm14122-201ENSMUST00000122076 973 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm24961-201ENSMUST00000157918 184 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Col2a1P28481 AC073947.1-201ENSMUST00000216991 649 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Col2a1P28481 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col2a1P28481 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm26019-201ENSMUST00000104407 119 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm13501-201ENSMUST00000118477 979 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm11394-201ENSMUST00000181421 517 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm44523-201ENSMUST00000205616 417 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm44650-201ENSMUST00000206929 194 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm44852-201ENSMUST00000207950 369 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC5.07□□□□□ -1.6
Col2a1P28481 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.07□□□□□ -1.6
Col2a1P28481 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.07□□□□□ -1.6
Col2a1P28481 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Col2a1P28481 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col2a1P28481 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col2a1P28481 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col2a1P28481 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms