Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.25□□□□□ -1.57
Col1a1P11087 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Col1a1P11087 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col1a1P11087 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col1a1P11087 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col1a1P11087 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col1a1P11087 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 Mir292-201ENSMUST00000104847 82 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 Gm15534-201ENSMUST00000137642 562 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.25□□□□□ -1.57
Col1a1P11087 Gm24503-201ENSMUST00000158454 135 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col1a1P11087 Gm23816-201ENSMUST00000179617 132 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 Gm18011-201ENSMUST00000203717 565 ntBASIC5.25□□□□□ -1.57
Col1a1P11087 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col1a1P11087 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col1a1P11087 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col1a1P11087 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Col1a1P11087 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col1a1P11087 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm11742-201ENSMUST00000119903 233 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm25714-201ENSMUST00000158626 296 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm44485-201ENSMUST00000199569 137 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Col1a1P11087 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col1a1P11087 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col1a1P11087 Gm42996-201ENSMUST00000196116 1636 ntBASIC5.24□□□□□ -1.57
Col1a1P11087 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm25177-201ENSMUST00000122634 117 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Gm25999-201ENSMUST00000175398 133 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm43895-201ENSMUST00000203219 855 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Gm34272-201ENSMUST00000208886 253 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col1a1P11087 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col1a1P11087 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col1a1P11087 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.23□□□□□ -1.57
Col1a1P11087 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col1a1P11087 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col1a1P11087 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col1a1P11087 Gm24788-201ENSMUST00000104283 156 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm12245-201ENSMUST00000117266 357 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm12340-201ENSMUST00000121617 462 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.22□□□□□ -1.57
Col1a1P11087 Gm6650-201ENSMUST00000166710 614 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm28195-201ENSMUST00000186992 372 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm29428-201ENSMUST00000190086 409 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm19774-201ENSMUST00000190667 114 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm37050-201ENSMUST00000193464 466 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.22□□□□□ -1.57
Col1a1P11087 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col1a1P11087 Mir132-201ENSMUST00000083603 66 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Mir323-201ENSMUST00000083683 86 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms