Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Atf6F6VAN0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atf6F6VAN0 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atf6F6VAN0 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Atf6F6VAN0 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Atf6F6VAN0 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm23692-201ENSMUST00000101881 160 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm9059-201ENSMUST00000118319 183 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm11813-201ENSMUST00000118586 291 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm13493-201ENSMUST00000120318 493 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm11252-201ENSMUST00000120572 939 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm13998-201ENSMUST00000120952 335 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm9428-201ENSMUST00000127214 769 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm24059-201ENSMUST00000157493 312 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm23030-201ENSMUST00000158004 273 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm23583-201ENSMUST00000158533 289 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm25163-201ENSMUST00000158905 104 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm22701-201ENSMUST00000175371 291 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm44370-201ENSMUST00000175436 112 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm36986-201ENSMUST00000195320 353 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm44853-201ENSMUST00000209070 250 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 AC120540.1-201ENSMUST00000221879 324 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm7808-201ENSMUST00000082002 387 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm22810-201ENSMUST00000082741 158 ntBASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Atf6F6VAN0 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.15□□□□□ -1.43
Atf6F6VAN0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.15□□□□□ -1.43
Atf6F6VAN0 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atf6F6VAN0 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atf6F6VAN0 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm3940-201ENSMUST00000105087 432 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm12267-201ENSMUST00000121609 761 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm11609-201ENSMUST00000121926 793 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm17054-201ENSMUST00000169811 259 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm18006-201ENSMUST00000177411 662 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm27006-201ENSMUST00000182218 943 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm28973-201ENSMUST00000189310 613 ntBASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atf6F6VAN0 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms