Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm11673-201ENSMUST00000117846 331 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm25392-201ENSMUST00000157335 297 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm43577-201ENSMUST00000197090 3344 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm14985-201ENSMUST00000118693 786 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm12691-201ENSMUST00000120186 456 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm4410-201ENSMUST00000199349 686 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a3E9PWQ3 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm5876-201ENSMUST00000203735 243 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Mir1195-201ENSMUST00000116818 98 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm12041-201ENSMUST00000121606 602 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm26214-201ENSMUST00000158581 107 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm18426-201ENSMUST00000191874 973 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm37001-201ENSMUST00000193377 190 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm45156-201ENSMUST00000207255 439 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Col6a3E9PWQ3 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 Gm26146-201ENSMUST00000104478 185 ntBASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 Gm12719-201ENSMUST00000118859 241 ntBASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 Gm18877-201ENSMUST00000207706 539 ntBASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.34□□□□□ -1.72
Col6a3E9PWQ3 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 AC158779.2-201ENSMUST00000227902 1947 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm11369-201ENSMUST00000120812 318 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm24636-201ENSMUST00000158673 288 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms