Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm43418-201ENSMUST00000201334 428 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm7825-201ENSMUST00000204046 416 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Robo2-210ENSMUST00000226478 8059 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm26146-201ENSMUST00000104478 185 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm14677-201ENSMUST00000117866 486 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm12891-201ENSMUST00000119358 240 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm8757-201ENSMUST00000119660 372 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm14267-201ENSMUST00000119751 496 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm14601-201ENSMUST00000120892 236 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm28116-201ENSMUST00000189064 387 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm28843-201ENSMUST00000189198 678 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm29552-201ENSMUST00000190548 660 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm29546-201ENSMUST00000191171 678 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm37477-201ENSMUST00000195215 884 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm42924-201ENSMUST00000197261 185 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm42999-201ENSMUST00000198049 786 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm19761-201ENSMUST00000205372 391 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm19256-201ENSMUST00000218550 231 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm2614-201ENSMUST00000223227 403 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx6-1Q99MA9 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Nkx6-1Q99MA9 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms