Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm26178-201ENSMUST00000177706 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm26465-201ENSMUST00000178517 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm24317-201ENSMUST00000178536 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm8532-201ENSMUST00000179174 461 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm25021-201ENSMUST00000179184 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm22995-201ENSMUST00000179670 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm24424-201ENSMUST00000179714 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm24389-201ENSMUST00000179962 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm25672-201ENSMUST00000180111 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm21856-201ENSMUST00000187547 696 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm29163-201ENSMUST00000188029 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm21735-201ENSMUST00000190360 696 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm8009-201ENSMUST00000191672 436 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm38046-201ENSMUST00000192733 550 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm19739-201ENSMUST00000195941 153 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm42832-201ENSMUST00000196361 745 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm43114-201ENSMUST00000198298 343 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm29778-201ENSMUST00000201667 466 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm5990-201ENSMUST00000203126 746 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm2996-201ENSMUST00000211398 537 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 AC162387.1-201ENSMUST00000213369 213 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 AC153141.1-201ENSMUST00000218636 501 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm6171-201ENSMUST00000220760 645 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 AC161572.1-201ENSMUST00000227486 640 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm8256-203ENSMUST00000228692 591 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm24037-201ENSMUST00000082871 180 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm23815-201ENSMUST00000083231 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm23520-201ENSMUST00000093736 107 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm14390-201ENSMUST00000117505 1695 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm14681-201ENSMUST00000118047 411 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm6446-201ENSMUST00000120604 818 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm25827-201ENSMUST00000157089 107 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm24343-201ENSMUST00000158708 111 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm16269-201ENSMUST00000160532 409 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm23864-201ENSMUST00000177607 107 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm5983-201ENSMUST00000197739 770 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm5306-201ENSMUST00000203325 757 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms