Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm44852-201ENSMUST00000207950 369 ntBASIC6.29□□□□□ -1.4
Usp47Q8BY87 CR974429.1-201ENSMUST00000220877 827 ntBASIC6.29□□□□□ -1.4
Usp47Q8BY87 AC154788.1-201ENSMUST00000225003 340 ntBASIC6.29□□□□□ -1.4
Usp47Q8BY87 AC174459.2-201ENSMUST00000226036 160 ntBASIC6.29□□□□□ -1.4
Usp47Q8BY87 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.29□□□□□ -1.4
Usp47Q8BY87 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Usp47Q8BY87 Gm32444-201ENSMUST00000195147 3511 ntBASIC6.29□□□□□ -1.4
Usp47Q8BY87 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm7834-201ENSMUST00000117560 437 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm11625-201ENSMUST00000119535 296 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm29228-201ENSMUST00000185489 418 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm43370-201ENSMUST00000196437 284 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm43037-201ENSMUST00000196808 250 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 AC158807.1-201ENSMUST00000217959 187 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 AC183096.1-201ENSMUST00000226392 130 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.28□□□□□ -1.4
Usp47Q8BY87 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp47Q8BY87 Gm45235-201ENSMUST00000208016 4465 ntBASIC6.27□□□□□ -1.4
Usp47Q8BY87 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm27457-201ENSMUST00000184771 156 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm27414-201ENSMUST00000185033 381 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm36998-201ENSMUST00000193205 704 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp47Q8BY87 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 AC119241.1-201ENSMUST00000223651 534 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 AC114573.1-201ENSMUST00000224120 1210 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 AL606513.1-201ENSMUST00000225369 579 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 CT030662.2-201ENSMUST00000226942 805 ntBASIC6.27□□□□□ -1.41
Usp47Q8BY87 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Usp47Q8BY87 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm42548-201ENSMUST00000202669 3933 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm14753-201ENSMUST00000118503 246 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm11510-201ENSMUST00000120278 347 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm22613-201ENSMUST00000122679 292 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm23964-201ENSMUST00000157966 107 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm37050-201ENSMUST00000193464 466 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm18452-201ENSMUST00000202968 1111 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm18306-201ENSMUST00000207338 569 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm18462-201ENSMUST00000208112 417 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm23928-201ENSMUST00000082469 145 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Gm42876-201ENSMUST00000196989 3215 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.26□□□□□ -1.41
Usp47Q8BY87 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Usp47Q8BY87 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp47Q8BY87 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp47Q8BY87 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp47Q8BY87 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Usp47Q8BY87 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Usp47Q8BY87 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Usp47Q8BY87 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms