Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm42999-201ENSMUST00000198049 786 ntBASIC4.62□□□□□ -1.67
Six4Q61321 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.62□□□□□ -1.67
Six4Q61321 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.62□□□□□ -1.67
Six4Q61321 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.62□□□□□ -1.67
Six4Q61321 Gm45392-201ENSMUST00000210441 214 ntBASIC4.62□□□□□ -1.67
Six4Q61321 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Six4Q61321 Gm7045-201ENSMUST00000221466 605 ntBASIC4.62□□□□□ -1.67
Six4Q61321 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Six4Q61321 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Six4Q61321 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Six4Q61321 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Six4Q61321 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Six4Q61321 Gm23623-201ENSMUST00000082461 107 ntBASIC4.62□□□□□ -1.67
Six4Q61321 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Six4Q61321 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.62□□□□□ -1.67
Six4Q61321 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Six4Q61321 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Six4Q61321 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Six4Q61321 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Six4Q61321 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Six4Q61321 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Six4Q61321 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Six4Q61321 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm12112-201ENSMUST00000117772 231 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm11212-201ENSMUST00000118337 618 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm22383-201ENSMUST00000158188 327 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm22177-201ENSMUST00000175002 158 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm6214-201ENSMUST00000178845 541 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm2950-201ENSMUST00000185530 520 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm6051-201ENSMUST00000201529 352 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm21112-201ENSMUST00000212224 578 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm7760-201ENSMUST00000212265 578 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Gm7807-201ENSMUST00000212475 578 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Six4Q61321 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Six4Q61321 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Six4Q61321 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Six4Q61321 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Six4Q61321 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Six4Q61321 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Six4Q61321 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Six4Q61321 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.61□□□□□ -1.67
Six4Q61321 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Six4Q61321 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.6□□□□□ -1.67
Six4Q61321 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Six4Q61321 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Six4Q61321 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Six4Q61321 Gm15752-201ENSMUST00000117427 394 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm13755-201ENSMUST00000118509 305 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm8051-201ENSMUST00000120464 466 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm13220-201ENSMUST00000121535 508 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.6□□□□□ -1.67
Six4Q61321 Gm23496-201ENSMUST00000157741 248 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 Gm43717-201ENSMUST00000198684 310 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm43005-201ENSMUST00000199015 648 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm45228-201ENSMUST00000206585 352 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Gm45359-201ENSMUST00000210635 427 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.6□□□□□ -1.67
Six4Q61321 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.6□□□□□ -1.67
Six4Q61321 Gm6988-201ENSMUST00000222676 375 ntBASIC4.6□□□□□ -1.67
Six4Q61321 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.6□□□□□ -1.67
Six4Q61321 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Six4Q61321 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Six4Q61321 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Six4Q61321 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.6□□□□□ -1.67
Six4Q61321 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Six4Q61321 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Six4Q61321 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.59□□□□□ -1.67
Six4Q61321 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Six4Q61321 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Six4Q61321 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Six4Q61321 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Six4Q61321 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Six4Q61321 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms