Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm17915-201ENSMUST00000222077 548 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm15560-201ENSMUST00000117107 643 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm13932-201ENSMUST00000120873 610 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm14500-201ENSMUST00000121647 113 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm13745-201ENSMUST00000121994 527 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm22177-201ENSMUST00000175002 158 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm29484-201ENSMUST00000186067 324 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm37881-201ENSMUST00000193001 421 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm37272-201ENSMUST00000193401 488 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm42720-201ENSMUST00000196813 300 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm43005-201ENSMUST00000199015 648 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm34224-201ENSMUST00000204606 364 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm4290-201ENSMUST00000206897 814 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm6171-201ENSMUST00000220760 645 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Nsa2-203ENSMUST00000225410 974 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm25821-201ENSMUST00000093657 133 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3bQ3ULL6 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm23014-201ENSMUST00000104144 130 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm12237-201ENSMUST00000120158 470 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm15166-201ENSMUST00000120790 385 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm13220-201ENSMUST00000121535 508 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm11910-201ENSMUST00000121624 432 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm25655-201ENSMUST00000158465 290 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm27165-201ENSMUST00000183951 232 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm18728-201ENSMUST00000186155 753 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm17956-201ENSMUST00000199931 838 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm44054-201ENSMUST00000203814 372 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm44523-201ENSMUST00000205616 417 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms