Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm24944-201ENSMUST00000158330 128 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm21959-201ENSMUST00000178439 452 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm27805-201ENSMUST00000184513 79 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm18352-201ENSMUST00000189113 902 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm2979-201ENSMUST00000193442 463 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm43828-201ENSMUST00000196890 639 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm42666-201ENSMUST00000201954 152 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm45081-201ENSMUST00000206281 572 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Mir346-201ENSMUST00000083547 98 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm22498-201ENSMUST00000104497 86 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm15012-201ENSMUST00000119176 106 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm14067-201ENSMUST00000119340 314 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm12852-201ENSMUST00000119478 719 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm13815-201ENSMUST00000119963 412 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm15057-201ENSMUST00000121516 534 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm23121-201ENSMUST00000157653 173 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm43370-201ENSMUST00000196437 284 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm42694-201ENSMUST00000196951 358 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm32536-201ENSMUST00000205209 445 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm44852-201ENSMUST00000207950 369 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm22155-201ENSMUST00000083836 162 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.03□□□□□ -1.76
Nkx3-1P97436 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.03□□□□□ -1.77
Nkx3-1P97436 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Nkx3-1P97436 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.03□□□□□ -1.77
Nkx3-1P97436 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm23855-201ENSMUST00000158377 135 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm21816-201ENSMUST00000179255 360 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Mir6414-201ENSMUST00000183685 82 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm28859-201ENSMUST00000186650 616 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms