Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm5133-201ENSMUST00000118940 1255 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm11692-201ENSMUST00000122121 902 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm7241-201ENSMUST00000159853 357 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm20657-201ENSMUST00000177079 515 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm37492-201ENSMUST00000191948 376 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm7142-201ENSMUST00000194232 586 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.03□□□□□ -1.92
PrkdcP97313 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PrkdcP97313 CT025710.1-201ENSMUST00000222949 2533 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm12071-201ENSMUST00000121968 469 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PrkdcP97313 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.03□□□□□ -1.93
PrkdcP97313 Gm3470-201ENSMUST00000160819 420 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
PrkdcP97313 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Mir7118-201ENSMUST00000197760 61 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Gm45343-201ENSMUST00000210452 828 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Gm6929-201ENSMUST00000210930 468 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Gm18903-201ENSMUST00000215343 480 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
PrkdcP97313 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
PrkdcP97313 Gm10704-201ENSMUST00000098952 730 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 AC158779.2-201ENSMUST00000227902 1947 ntBASIC3.03□□□□□ -1.93
PrkdcP97313 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
PrkdcP97313 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm25861-201ENSMUST00000158251 109 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm28267-201ENSMUST00000191093 265 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm5995-201ENSMUST00000204107 1273 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PrkdcP97313 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm24371-201ENSMUST00000122662 267 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm36382-201ENSMUST00000198892 541 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm8820-201ENSMUST00000204077 571 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm24147-201ENSMUST00000082763 144 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PrkdcP97313 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm1966-201ENSMUST00000184540 7293 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm25539-201ENSMUST00000116886 122 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm16290-201ENSMUST00000161175 474 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
PrkdcP97313 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
PrkdcP97313 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.02□□□□□ -1.93
PrkdcP97313 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PrkdcP97313 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
PrkdcP97313 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PrkdcP97313 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
PrkdcP97313 Gm24008-201ENSMUST00000157733 138 ntBASIC3.01□□□□□ -1.93
PrkdcP97313 Gm38098-201ENSMUST00000194115 241 ntBASIC3.01□□□□□ -1.93
PrkdcP97313 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.01□□□□□ -1.93
PrkdcP97313 Gm45860-201ENSMUST00000212700 334 ntBASIC3.01□□□□□ -1.93
PrkdcP97313 Gm34165-201ENSMUST00000222012 1174 ntBASIC3.01□□□□□ -1.93
PrkdcP97313 AC156576.2-202ENSMUST00000222525 411 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms