Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm22714-201ENSMUST00000116894 78 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm13770-201ENSMUST00000117149 305 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm14793-201ENSMUST00000118739 311 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm11798-201ENSMUST00000119150 421 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm22491-201ENSMUST00000157190 102 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm27313-201ENSMUST00000183500 142 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm27976-201ENSMUST00000183635 162 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm27985-201ENSMUST00000185112 378 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm19089-201ENSMUST00000197207 613 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm43315-201ENSMUST00000198120 313 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm17834-201ENSMUST00000204322 891 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm43892-201ENSMUST00000204373 265 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm23624-201ENSMUST00000082463 321 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh1F7BJK1 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Pramel-201ENSMUST00000118979 1383 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm14267-201ENSMUST00000119751 496 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm11227-201ENSMUST00000119774 471 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm11369-201ENSMUST00000120812 318 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm12369-201ENSMUST00000121343 942 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm14366-201ENSMUST00000121970 730 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Gm23867-201ENSMUST00000122649 274 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.3□□□□□ -1.56
Pcdh1F7BJK1 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms