Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.16□□□□□ -1.58
Vps28Q9D1C8 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Vps28Q9D1C8 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm24935-201ENSMUST00000103770 110 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm14086-201ENSMUST00000117152 173 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm7312-201ENSMUST00000118798 469 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm15357-201ENSMUST00000119160 285 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm15828-201ENSMUST00000119911 522 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm13459-201ENSMUST00000121558 646 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm15885-201ENSMUST00000122114 388 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm25150-201ENSMUST00000157121 60 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm23700-201ENSMUST00000158842 102 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm24111-201ENSMUST00000175491 97 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm2497-201ENSMUST00000189539 601 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm42663-201ENSMUST00000199883 351 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm8679-201ENSMUST00000210651 1036 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm4263-202ENSMUST00000221392 667 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm26330-201ENSMUST00000082817 104 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Snord15b-201ENSMUST00000083032 145 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Vps28Q9D1C8 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm6300-201ENSMUST00000192393 1498 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm13787-201ENSMUST00000120422 168 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm15225-201ENSMUST00000120449 1017 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm13484-201ENSMUST00000120738 412 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm12685-201ENSMUST00000121702 214 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm25179-201ENSMUST00000122632 128 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm16345-201ENSMUST00000146065 158 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm23534-201ENSMUST00000157539 97 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm25907-201ENSMUST00000158486 125 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm21991-201ENSMUST00000180006 508 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm28660-201ENSMUST00000186496 253 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm45189-201ENSMUST00000208567 363 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm8911-201ENSMUST00000213986 652 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm9512-201ENSMUST00000223112 497 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms