Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm11821-201ENSMUST00000117335 979 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm12073-201ENSMUST00000117382 524 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14220-201ENSMUST00000118114 449 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14836-201ENSMUST00000118567 471 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm4910-201ENSMUST00000119605 366 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Mir6374-201ENSMUST00000184003 107 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm29610-201ENSMUST00000187749 453 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm2497-201ENSMUST00000189539 601 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm18747-201ENSMUST00000198129 648 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm6366-201ENSMUST00000198766 826 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm34149-201ENSMUST00000203547 304 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm32453-201ENSMUST00000204183 456 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm20946-201ENSMUST00000212367 461 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm26449-201ENSMUST00000082452 104 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc28bQ8CEG5 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm23692-201ENSMUST00000101881 160 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm4596-201ENSMUST00000117197 442 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm11912-201ENSMUST00000117235 264 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm11790-201ENSMUST00000119569 455 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm15745-201ENSMUST00000119807 115 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm13132-201ENSMUST00000121194 472 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm12978-201ENSMUST00000121250 522 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm12893-201ENSMUST00000121732 275 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm29284-201ENSMUST00000188363 255 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28957-201ENSMUST00000190174 373 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm9480-201ENSMUST00000198038 616 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm9038-201ENSMUST00000203400 604 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm44865-201ENSMUST00000207240 531 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 AC134917.2-201ENSMUST00000223354 124 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 AC116596.2-203ENSMUST00000227345 731 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14335-201ENSMUST00000119165 810 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm16106-201ENSMUST00000119187 294 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm13245-201ENSMUST00000119646 260 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm15719-201ENSMUST00000120619 635 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm26347-201ENSMUST00000157526 131 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm25447-201ENSMUST00000158997 128 ntBASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc28bQ8CEG5 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms