Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Depdc1bQ8BH88 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm11822-201ENSMUST00000119177 415 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm16259-201ENSMUST00000145241 553 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm3362-201ENSMUST00000148102 466 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm23673-201ENSMUST00000157474 298 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm24188-201ENSMUST00000157980 108 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm8614-201ENSMUST00000182528 978 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Mir6963-201ENSMUST00000183535 71 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Mir7031-201ENSMUST00000183860 65 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm19280-201ENSMUST00000190191 205 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm18150-201ENSMUST00000195341 645 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm20239-201ENSMUST00000196610 982 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm43309-201ENSMUST00000200837 458 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm44259-201ENSMUST00000204996 298 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm45078-201ENSMUST00000205343 546 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm8264-201ENSMUST00000217801 465 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm8158-201ENSMUST00000219220 465 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm8112-201ENSMUST00000219637 465 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm22005-201ENSMUST00000082795 141 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Depdc1bQ8BH88 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm13491-201ENSMUST00000118267 235 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Mir7028-201ENSMUST00000185016 64 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm29332-201ENSMUST00000190829 227 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm37243-201ENSMUST00000193407 595 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Depdc1bQ8BH88 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm22676-201ENSMUST00000116972 129 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm11196-201ENSMUST00000119052 395 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm12105-201ENSMUST00000120846 779 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm24217-201ENSMUST00000158260 133 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm19891-201ENSMUST00000189771 303 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm43717-201ENSMUST00000198684 310 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm32308-201ENSMUST00000203053 280 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.19□□□□□ -1.58
Depdc1bQ8BH88 Gm20586-201ENSMUST00000210122 547 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms