Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm2020-201ENSMUST00000145242 579 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm22261-201ENSMUST00000158691 324 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 Fth-ps2-201ENSMUST00000168364 516 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm29334-201ENSMUST00000190334 357 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm3841-201ENSMUST00000191399 451 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 Ighv12-1-201ENSMUST00000195542 329 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 AC160016.1-201ENSMUST00000215589 448 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.98□□□□□ -1.13
Clcn1Q64347 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm18409-202ENSMUST00000220105 529 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC7.98□□□□□ -1.13
Clcn1Q64347 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Clcn1Q64347 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 Gm18360-201ENSMUST00000173327 1524 ntBASIC7.98□□□□□ -1.13
Clcn1Q64347 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clcn1Q64347 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.98□□□□□ -1.13
Clcn1Q64347 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm22714-201ENSMUST00000116894 78 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm15332-201ENSMUST00000118386 357 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm11438-201ENSMUST00000121582 189 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm14362-201ENSMUST00000121679 273 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm11759-201ENSMUST00000121742 464 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.97□□□□□ -1.13
Clcn1Q64347 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm15254-201ENSMUST00000149567 273 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm24735-201ENSMUST00000158859 118 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Mir3097-201ENSMUST00000175356 67 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm26988-201ENSMUST00000183296 945 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm20561-201ENSMUST00000188131 292 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm8419-201ENSMUST00000189886 412 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm42832-201ENSMUST00000196361 745 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm42437-201ENSMUST00000197263 923 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm43083-201ENSMUST00000199594 476 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm44923-201ENSMUST00000206673 85 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 AC138290.2-201ENSMUST00000218822 369 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm46996-201ENSMUST00000220924 408 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm32526-201ENSMUST00000221878 981 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Clcn1Q64347 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 AC121844.2-201ENSMUST00000219067 2066 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Clcn1Q64347 AC159326.1-201ENSMUST00000219989 1302 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.97□□□□□ -1.13
Clcn1Q64347 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Clcn1Q64347 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clcn1Q64347 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Clcn1Q64347 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clcn1Q64347 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clcn1Q64347 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Clcn1Q64347 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Clcn1Q64347 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clcn1Q64347 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clcn1Q64347 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clcn1Q64347 Gm43924-201ENSMUST00000204851 1736 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms