Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.45□□□□□ -1.38
Trim28Q62318 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 AC102431.1-201ENSMUST00000223773 1449 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Trim28Q62318 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim28Q62318 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim28Q62318 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Gm12401-201ENSMUST00000118435 228 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm5754-201ENSMUST00000118774 892 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.45□□□□□ -1.38
Trim28Q62318 Gm16260-201ENSMUST00000155141 304 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm22226-201ENSMUST00000157355 109 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm23318-201ENSMUST00000158000 108 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm23046-201ENSMUST00000158369 284 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Gm16026-202ENSMUST00000159695 772 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Gm18953-201ENSMUST00000175694 300 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Gm26968-201ENSMUST00000182894 481 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm9569-201ENSMUST00000187492 787 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm28384-201ENSMUST00000189079 463 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm43765-201ENSMUST00000196303 893 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.45□□□□□ -1.38
Trim28Q62318 Gm42164-201ENSMUST00000198881 379 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Gm19196-201ENSMUST00000209258 357 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim28Q62318 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr1160-201ENSMUST00000099839 960 ntBASIC6.45□□□□□ -1.38
Trim28Q62318 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Trim28Q62318 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim28Q62318 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim28Q62318 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Naip3-201ENSMUST00000118082 4208 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm23594-201ENSMUST00000104307 134 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm14706-201ENSMUST00000117744 255 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm23082-201ENSMUST00000157852 133 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm18396-201ENSMUST00000177095 361 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Mir6344-201ENSMUST00000183462 104 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm18426-201ENSMUST00000191874 973 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm36983-201ENSMUST00000192280 1102 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm17771-201ENSMUST00000194477 1147 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm18791-201ENSMUST00000204611 726 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm3213-201ENSMUST00000219296 441 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm19233-201ENSMUST00000219772 936 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 AC162857.1-201ENSMUST00000226614 400 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.44□□□□□ -1.38
Trim28Q62318 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Trim28Q62318 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Trim28Q62318 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim28Q62318 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC6.44□□□□□ -1.38
Trim28Q62318 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim28Q62318 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim28Q62318 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim28Q62318 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms