Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm15206-201ENSMUST00000119143 454 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm15168-201ENSMUST00000121057 316 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm14957-201ENSMUST00000121069 817 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm14603-201ENSMUST00000121275 448 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm12005-201ENSMUST00000121451 379 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm24561-201ENSMUST00000175182 95 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm16378-201ENSMUST00000179168 342 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm4412-201ENSMUST00000186660 433 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm45171-201ENSMUST00000206360 736 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm46191-201ENSMUST00000218899 433 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm3338-201ENSMUST00000220982 269 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm7045-201ENSMUST00000221466 605 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.9□□□□□ -1.62
Upf3bQ3ULL6 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Upf3bQ3ULL6 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Upf3bQ3ULL6 Gm23193-201ENSMUST00000102427 82 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm23608-201ENSMUST00000104545 128 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm13771-201ENSMUST00000117988 238 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm29086-201ENSMUST00000186774 222 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm29085-201ENSMUST00000187108 225 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm8599-201ENSMUST00000193033 457 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm43015-201ENSMUST00000199087 565 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm17811-201ENSMUST00000206193 387 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.9□□□□□ -1.63
Upf3bQ3ULL6 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Neat1-201ENSMUST00000173672 20771 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm12520-201ENSMUST00000117493 316 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm14516-201ENSMUST00000120012 252 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm11584-201ENSMUST00000120636 325 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm5391-201ENSMUST00000121155 613 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm24113-201ENSMUST00000157477 276 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm23496-201ENSMUST00000157741 248 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm23925-202ENSMUST00000188429 132 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm37095-201ENSMUST00000195421 205 ntBASIC4.89□□□□□ -1.63
Upf3bQ3ULL6 Gm42983-201ENSMUST00000199879 815 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms