Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col17a1Q07563 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm13712-201ENSMUST00000117484 2295 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm37226-201ENSMUST00000191644 3255 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm42986-201ENSMUST00000201618 3385 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm37802-201ENSMUST00000194998 2643 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col17a1Q07563 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 CT009480.3-201ENSMUST00000224051 3032 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm12706-201ENSMUST00000121588 698 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm22038-201ENSMUST00000157277 242 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm24239-201ENSMUST00000157791 255 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm19739-201ENSMUST00000195941 153 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm44003-201ENSMUST00000203024 490 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm7786-201ENSMUST00000210494 436 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 AC156832.3-201ENSMUST00000215591 435 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 AC155923.1-201ENSMUST00000215676 356 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 AC157017.2-201ENSMUST00000218354 777 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Mir338-201ENSMUST00000083666 98 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm37628-201ENSMUST00000194644 5440 ntBASIC7.6□□□□□ -1.19
Col17a1Q07563 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col17a1Q07563 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.6□□□□□ -1.19
Col17a1Q07563 Gm18594-201ENSMUST00000175733 1403 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm43359-201ENSMUST00000197944 2200 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm37509-201ENSMUST00000194867 3169 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC7.59□□□□□ -1.19
Col17a1Q07563 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm24751-201ENSMUST00000157844 102 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm17711-201ENSMUST00000172028 237 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm29489-201ENSMUST00000188934 324 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Gm8745-201ENSMUST00000207846 782 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col17a1Q07563 AC164629.1-201ENSMUST00000220250 1113 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 AC151730.2-201ENSMUST00000224027 475 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col17a1Q07563 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 AC112972.2-201ENSMUST00000228702 2210 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col17a1Q07563 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.59□□□□□ -1.19
Col17a1Q07563 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.59□□□□□ -1.2
Col17a1Q07563 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 AC153912.2-201ENSMUST00000215840 2015 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Col17a1Q07563 Mir690-201ENSMUST00000102110 109 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm24374-201ENSMUST00000104394 106 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm11446-201ENSMUST00000121319 866 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC7.58□□□□□ -1.2
Col17a1Q07563 Mir3473a-201ENSMUST00000175011 78 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col17a1Q07563 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm6680-201ENSMUST00000192789 950 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm38333-201ENSMUST00000193608 604 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm45070-201ENSMUST00000208100 246 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 AC167192.4-201ENSMUST00000224087 993 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col17a1Q07563 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col17a1Q07563 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms