Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HttP42859 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HttP42859 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HttP42859 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.63□□□□□ -1.67
HttP42859 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.63□□□□□ -1.67
HttP42859 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.63□□□□□ -1.67
HttP42859 Gm8288-201ENSMUST00000223406 593 ntBASIC4.63□□□□□ -1.67
HttP42859 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.63□□□□□ -1.67
HttP42859 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HttP42859 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HttP42859 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HttP42859 AC124581.3-201ENSMUST00000224270 1624 ntBASIC4.63□□□□□ -1.67
HttP42859 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HttP42859 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HttP42859 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.62□□□□□ -1.67
HttP42859 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
HttP42859 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Gm22890-201ENSMUST00000158642 144 ntBASIC4.62□□□□□ -1.67
HttP42859 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.62□□□□□ -1.67
HttP42859 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Gm44946-201ENSMUST00000208425 572 ntBASIC4.62□□□□□ -1.67
HttP42859 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.62□□□□□ -1.67
HttP42859 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Gm15018-201ENSMUST00000117090 633 ntBASIC4.62□□□□□ -1.67
HttP42859 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.62□□□□□ -1.67
HttP42859 Gm7468-201ENSMUST00000203900 652 ntBASIC4.62□□□□□ -1.67
HttP42859 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.62□□□□□ -1.67
HttP42859 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HttP42859 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.62□□□□□ -1.67
HttP42859 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.62□□□□□ -1.67
HttP42859 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.62□□□□□ -1.67
HttP42859 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.62□□□□□ -1.67
HttP42859 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HttP42859 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HttP42859 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.62□□□□□ -1.67
HttP42859 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HttP42859 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Gm3470-201ENSMUST00000160819 420 ntBASIC4.61□□□□□ -1.67
HttP42859 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.61□□□□□ -1.67
HttP42859 Gm45860-201ENSMUST00000212700 334 ntBASIC4.61□□□□□ -1.67
HttP42859 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HttP42859 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.61□□□□□ -1.67
HttP42859 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HttP42859 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.61□□□□□ -1.67
HttP42859 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HttP42859 Gm25539-201ENSMUST00000116886 122 ntBASIC4.61□□□□□ -1.67
HttP42859 Gm18429-201ENSMUST00000198707 421 ntBASIC4.61□□□□□ -1.67
HttP42859 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.61□□□□□ -1.67
HttP42859 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.61□□□□□ -1.67
HttP42859 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HttP42859 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 Gm38043-201ENSMUST00000195501 5141 ntBASIC4.61□□□□□ -1.67
HttP42859 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.61□□□□□ -1.67
HttP42859 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.61□□□□□ -1.67
HttP42859 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.61□□□□□ -1.67
HttP42859 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.61□□□□□ -1.67
HttP42859 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.61□□□□□ -1.67
HttP42859 Gm8137-201ENSMUST00000218997 463 ntBASIC4.61□□□□□ -1.67
HttP42859 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HttP42859 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HttP42859 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.61□□□□□ -1.67
HttP42859 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HttP42859 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HttP42859 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC4.61□□□□□ -1.67
HttP42859 AC154354.1-201ENSMUST00000224585 2109 ntBASIC4.6□□□□□ -1.67
HttP42859 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.6□□□□□ -1.67
HttP42859 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
HttP42859 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HttP42859 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.6□□□□□ -1.67
HttP42859 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.6□□□□□ -1.67
HttP42859 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HttP42859 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HttP42859 Gm12131-201ENSMUST00000117479 359 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm37881-201ENSMUST00000193001 421 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms