Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm24444-201ENSMUST00000157244 308 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm25389-201ENSMUST00000157340 286 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm6872-201ENSMUST00000165001 700 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Mir5112-201ENSMUST00000174897 60 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21241-201ENSMUST00000179551 934 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm28353-201ENSMUST00000186482 570 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm28533-201ENSMUST00000186741 570 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm20819-201ENSMUST00000191091 925 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm20871-201ENSMUST00000191322 931 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm34176-201ENSMUST00000192621 474 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm37989-201ENSMUST00000195202 803 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm43992-201ENSMUST00000204358 197 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm7443-201ENSMUST00000206355 378 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm18850-201ENSMUST00000211578 388 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm18704-201ENSMUST00000219736 446 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.11□□□□□ -1.59
Hoxc11P31313 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm15185-201ENSMUST00000117397 746 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm25176-201ENSMUST00000122640 125 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm24690-201ENSMUST00000157759 97 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm23546-201ENSMUST00000158211 137 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm17038-201ENSMUST00000166586 494 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm23806-201ENSMUST00000175157 109 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm27036-201ENSMUST00000182465 980 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Mir6400-201ENSMUST00000184870 92 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm28974-201ENSMUST00000187893 231 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
Hoxc11P31313 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Mir703-201ENSMUST00000197105 109 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms