Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm8276-201ENSMUST00000192231 1812 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 AC135119.1-202ENSMUST00000228435 2203 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm23941-201ENSMUST00000101953 107 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm22256-201ENSMUST00000102291 107 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm23744-201ENSMUST00000104231 149 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm25724-201ENSMUST00000104531 117 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm12468-201ENSMUST00000116189 404 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm13156-201ENSMUST00000118348 321 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm12768-201ENSMUST00000120055 759 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.36□□□□□ -1.55
Hoxd3P09027 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm26102-201ENSMUST00000157251 284 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm22219-201ENSMUST00000157562 319 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm25556-201ENSMUST00000158077 144 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm26357-201ENSMUST00000158218 115 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm22857-201ENSMUST00000174969 134 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Mir5099-201ENSMUST00000175257 74 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm22307-201ENSMUST00000180019 107 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Mir6401-201ENSMUST00000184499 109 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm28785-201ENSMUST00000187478 379 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm9127-201ENSMUST00000188041 985 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm37881-201ENSMUST00000193001 421 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm43779-201ENSMUST00000196691 829 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm9317-201ENSMUST00000197055 862 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm43418-201ENSMUST00000201334 428 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm44419-201ENSMUST00000203338 229 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm44336-201ENSMUST00000203696 468 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm44896-201ENSMUST00000206190 772 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm31166-201ENSMUST00000209326 288 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.36□□□□□ -1.55
Hoxd3P09027 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm24036-201ENSMUST00000082868 156 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.36□□□□□ -1.55
Hoxd3P09027 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Hoxd3P09027 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxd3P09027 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.35□□□□□ -1.55
Hoxd3P09027 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Hoxd3P09027 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxd3P09027 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxd3P09027 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxd3P09027 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxd3P09027 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms