Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm23228-201ENSMUST00000157296 270 ntBASIC5.41□□□□□ -1.54
Col4a1P02463 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col4a1P02463 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.41□□□□□ -1.54
Col4a1P02463 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col4a1P02463 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col4a1P02463 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col4a1P02463 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.41□□□□□ -1.54
Col4a1P02463 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.41□□□□□ -1.54
Col4a1P02463 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.41□□□□□ -1.54
Col4a1P02463 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col4a1P02463 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a1P02463 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a1P02463 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a1P02463 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a1P02463 Gm6584-201ENSMUST00000119671 447 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.4□□□□□ -1.54
Col4a1P02463 Gm17109-201ENSMUST00000163985 358 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Gm28267-201ENSMUST00000191093 265 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Gm38270-201ENSMUST00000192721 407 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Gm8703-201ENSMUST00000203793 730 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a1P02463 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col4a1P02463 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a1P02463 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.4□□□□□ -1.54
Col4a1P02463 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.4□□□□□ -1.54
Col4a1P02463 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a1P02463 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.4□□□□□ -1.55
Col4a1P02463 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a1P02463 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Col4a1P02463 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a1P02463 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a1P02463 Gm43853-201ENSMUST00000197162 301 ntBASIC5.4□□□□□ -1.55
Col4a1P02463 Gm43036-201ENSMUST00000200594 373 ntBASIC5.4□□□□□ -1.55
Col4a1P02463 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.4□□□□□ -1.55
Col4a1P02463 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.4□□□□□ -1.55
Col4a1P02463 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.4□□□□□ -1.55
Col4a1P02463 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.4□□□□□ -1.55
Col4a1P02463 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a1P02463 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm13268-201ENSMUST00000117485 433 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm14282-201ENSMUST00000119484 240 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm25104-201ENSMUST00000122476 163 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm10059-201ENSMUST00000131139 171 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a1P02463 Gm24961-201ENSMUST00000157918 184 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.39□□□□□ -1.55
Col4a1P02463 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Gm5374-202ENSMUST00000222910 314 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Col4a1P02463 Gm5548-201ENSMUST00000055878 397 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a1P02463 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a1P02463 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col4a1P02463 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.39□□□□□ -1.55
Col4a1P02463 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a1P02463 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col4a1P02463 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a1P02463 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col4a1P02463 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.38□□□□□ -1.55
Col4a1P02463 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a1P02463 Gm26418-201ENSMUST00000104275 137 ntBASIC5.38□□□□□ -1.55
Col4a1P02463 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.38□□□□□ -1.55
Col4a1P02463 Gm12885-201ENSMUST00000122246 328 ntBASIC5.38□□□□□ -1.55
Col4a1P02463 Gm2182-201ENSMUST00000145243 663 ntBASIC5.38□□□□□ -1.55
Col4a1P02463 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.38□□□□□ -1.55
Col4a1P02463 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Col4a1P02463 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.38□□□□□ -1.55
Col4a1P02463 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a1P02463 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col4a1P02463 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col4a1P02463 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a1P02463 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.38□□□□□ -1.55
Col4a1P02463 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.38□□□□□ -1.55
Col4a1P02463 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a1P02463 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms