Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm22428-201ENSMUST00000158554 132 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm24415-201ENSMUST00000180218 107 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm28871-201ENSMUST00000186191 687 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm10193-201ENSMUST00000188288 231 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm5734-201ENSMUST00000189787 913 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm21088-201ENSMUST00000190875 316 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm37774-201ENSMUST00000194401 245 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm37341-201ENSMUST00000194680 371 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm5322-201ENSMUST00000206142 699 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm4501-201ENSMUST00000207330 551 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm4528-201ENSMUST00000207905 551 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm17991-201ENSMUST00000208139 297 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm11360-201ENSMUST00000221898 262 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm10095-201ENSMUST00000222765 483 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm7887-201ENSMUST00000056948 537 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.19□□□□□ -1.42
Atf6F6VAN0 Gm42551-201ENSMUST00000197701 1573 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm18432-201ENSMUST00000195568 1451 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm9308-201ENSMUST00000119073 448 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm4234-201ENSMUST00000119747 714 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm14238-201ENSMUST00000120227 323 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm12308-201ENSMUST00000120440 389 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm12307-201ENSMUST00000120581 590 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm22478-201ENSMUST00000122570 154 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm16290-201ENSMUST00000161175 474 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm17121-201ENSMUST00000170414 847 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm17222-201ENSMUST00000180135 847 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm27348-201ENSMUST00000184511 170 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Trbv12-3-201ENSMUST00000192675 372 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm44374-201ENSMUST00000199821 140 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm18327-201ENSMUST00000202426 830 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm7890-201ENSMUST00000204877 601 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm18423-201ENSMUST00000205144 1074 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm18258-201ENSMUST00000210413 542 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm23851-201ENSMUST00000083831 103 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.18□□□□□ -1.42
Atf6F6VAN0 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atf6F6VAN0 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.17□□□□□ -1.42
Atf6F6VAN0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Atf6F6VAN0 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atf6F6VAN0 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Atf6F6VAN0 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Atf6F6VAN0 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.17□□□□□ -1.42
Atf6F6VAN0 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms