Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm11970-201ENSMUST00000116105 320 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm12520-201ENSMUST00000117493 316 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm14861-201ENSMUST00000119451 455 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm11584-201ENSMUST00000120636 325 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm22361-201ENSMUST00000158435 176 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm4412-201ENSMUST00000186660 433 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm18342-201ENSMUST00000186987 694 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm2427-201ENSMUST00000189121 881 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm43304-201ENSMUST00000196803 326 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm45171-201ENSMUST00000206360 736 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm3338-201ENSMUST00000220982 269 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm7045-201ENSMUST00000221466 605 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm22826-201ENSMUST00000083774 165 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa3Q9CQ71 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm23608-201ENSMUST00000104545 128 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm13932-201ENSMUST00000120873 610 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm15168-201ENSMUST00000121057 316 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm15275-201ENSMUST00000154752 347 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm24113-201ENSMUST00000157477 276 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Mir3090-201ENSMUST00000175597 87 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm8604-201ENSMUST00000183150 965 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm22897-202ENSMUST00000197782 127 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm17956-201ENSMUST00000199931 838 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.79□□□□□ -1.64
Rpa3Q9CQ71 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa3Q9CQ71 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms