Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm7709-201ENSMUST00000199391 1858 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Mir449c-201ENSMUST00000102192 109 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm14220-201ENSMUST00000118114 449 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm11268-201ENSMUST00000118347 267 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm8757-201ENSMUST00000119660 372 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm5384-201ENSMUST00000120313 463 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm14574-201ENSMUST00000120644 279 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm12936-201ENSMUST00000121439 301 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm12494-201ENSMUST00000121684 521 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm23435-201ENSMUST00000157183 156 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm2325-201ENSMUST00000186637 581 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm6137-201ENSMUST00000187552 578 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm28151-201ENSMUST00000189404 951 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm2623-201ENSMUST00000199229 286 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm4032-201ENSMUST00000210886 487 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm24043-201ENSMUST00000083108 116 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.52□□□□□ -1.37
Clp1Q99LI9 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clp1Q99LI9 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm23485-201ENSMUST00000104181 155 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm24230-201ENSMUST00000104313 129 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm24374-201ENSMUST00000104394 106 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm13811-201ENSMUST00000117800 256 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm13785-201ENSMUST00000119099 690 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm14731-201ENSMUST00000119216 376 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm12231-201ENSMUST00000119447 695 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm13482-201ENSMUST00000119842 254 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm12308-201ENSMUST00000120440 389 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm27905-201ENSMUST00000184005 207 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm27588-201ENSMUST00000185096 263 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm28724-201ENSMUST00000186149 625 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm10193-201ENSMUST00000188288 231 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm29754-201ENSMUST00000206269 358 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm7786-201ENSMUST00000210494 436 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm23423-201ENSMUST00000082782 106 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm23378-201ENSMUST00000082942 107 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms