Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.95□□□□□ -1.14
Trim35Q8C006 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim35Q8C006 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.95□□□□□ -1.14
Trim35Q8C006 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.95□□□□□ -1.14
Trim35Q8C006 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim35Q8C006 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim35Q8C006 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm12281-201ENSMUST00000119536 298 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm22519-201ENSMUST00000158270 178 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm25265-201ENSMUST00000158520 347 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm20545-201ENSMUST00000174739 210 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm6660-201ENSMUST00000179149 468 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm36985-201ENSMUST00000195595 379 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm17835-201ENSMUST00000196870 499 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm42578-201ENSMUST00000199960 194 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm18973-201ENSMUST00000205814 511 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm19810-201ENSMUST00000218521 251 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim35Q8C006 AC122877.1-201ENSMUST00000228873 218 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm23038-201ENSMUST00000083873 104 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Trim35Q8C006 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm7155-201ENSMUST00000121143 1671 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim35Q8C006 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim35Q8C006 Gm6418-201ENSMUST00000118325 3577 ntBASIC7.94□□□□□ -1.14
Trim35Q8C006 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
Trim35Q8C006 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim35Q8C006 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC7.93□□□□□ -1.14
Trim35Q8C006 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm26293-201ENSMUST00000104170 84 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm23131-201ENSMUST00000104253 132 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm11880-201ENSMUST00000117612 399 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm11849-201ENSMUST00000121293 261 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm25770-201ENSMUST00000158566 115 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm24899-201ENSMUST00000158892 73 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm18199-201ENSMUST00000173820 835 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm22118-201ENSMUST00000175593 171 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim35Q8C006 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm36946-201ENSMUST00000192706 435 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Ighv15-1-201ENSMUST00000194450 276 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm42489-201ENSMUST00000198964 669 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 AC107864.1-201ENSMUST00000217937 496 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 AC164297.3-201ENSMUST00000224238 94 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 AC122320.1-201ENSMUST00000227233 105 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 AC074315.1-201ENSMUST00000228801 214 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm24045-201ENSMUST00000083113 98 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm22576-201ENSMUST00000083733 104 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim35Q8C006 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Gm381-201ENSMUST00000117443 2037 ntBASIC7.93□□□□□ -1.14
Trim35Q8C006 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim35Q8C006 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms