Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm37135-201ENSMUST00000192652 534 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Igkv15-97-201ENSMUST00000197637 339 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm30646-201ENSMUST00000207662 180 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm32526-201ENSMUST00000221878 981 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm7808-201ENSMUST00000082002 387 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scaf4Q6PFF0 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scaf4Q6PFF0 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Scaf4Q6PFF0 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Scaf4Q6PFF0 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Scaf4Q6PFF0 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scaf4Q6PFF0 Pramel-201ENSMUST00000118979 1383 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm24273-201ENSMUST00000102332 164 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm12077-201ENSMUST00000117049 364 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm11270-201ENSMUST00000117685 471 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm12850-201ENSMUST00000119210 436 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm14563-201ENSMUST00000120571 354 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm11761-201ENSMUST00000121392 445 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm14678-201ENSMUST00000121396 482 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm22101-201ENSMUST00000157928 103 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm22733-201ENSMUST00000158094 91 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm22650-201ENSMUST00000175138 105 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm26993-201ENSMUST00000182766 789 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm29284-201ENSMUST00000188363 255 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm37203-201ENSMUST00000191618 385 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm44494-201ENSMUST00000196760 129 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm44463-201ENSMUST00000198895 137 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm44163-201ENSMUST00000205140 475 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm45474-201ENSMUST00000209471 408 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm8523-201ENSMUST00000211386 552 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm7570-201ENSMUST00000215246 698 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm25079-201ENSMUST00000082529 203 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm29486-201ENSMUST00000088648 372 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.71□□□□□ -1.5
Scaf4Q6PFF0 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms