Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm12760-201ENSMUST00000117861 482 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm14930-201ENSMUST00000118864 652 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm23496-201ENSMUST00000157741 248 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm24402-201ENSMUST00000157873 91 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm24188-201ENSMUST00000157980 108 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm3531-201ENSMUST00000162698 489 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm18350-201ENSMUST00000187395 955 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm28769-201ENSMUST00000190176 615 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm29785-201ENSMUST00000217033 383 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm16415-201ENSMUST00000080097 489 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm10916-201ENSMUST00000080330 483 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm25140-201ENSMUST00000083254 140 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm22826-201ENSMUST00000083774 165 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm22155-201ENSMUST00000083836 162 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC4.65□□□□□ -1.66
Trafd1Q3UDK1 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Trafd1Q3UDK1 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Trafd1Q3UDK1 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Trafd1Q3UDK1 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Trafd1Q3UDK1 Gm22020-201ENSMUST00000104358 136 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm13924-201ENSMUST00000119899 486 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm14784-201ENSMUST00000121604 663 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm26373-201ENSMUST00000157833 103 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm25048-201ENSMUST00000158598 91 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm4410-201ENSMUST00000199349 686 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm42579-201ENSMUST00000200512 734 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm6065-201ENSMUST00000081336 492 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trafd1Q3UDK1 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trafd1Q3UDK1 Mir676-201ENSMUST00000102443 89 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms