Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm23287-201ENSMUST00000179427 116 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm23143-201ENSMUST00000180137 116 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm25120-201ENSMUST00000180148 79 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm27818-201ENSMUST00000184536 159 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm19086-201ENSMUST00000190772 665 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm38283-201ENSMUST00000193041 695 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm36998-201ENSMUST00000193205 704 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm29813-201ENSMUST00000195856 447 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm9173-201ENSMUST00000198054 400 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm17984-201ENSMUST00000205286 859 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm45026-201ENSMUST00000205292 833 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm7530-201ENSMUST00000218466 605 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 CT025525.1-201ENSMUST00000226325 1054 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm26330-201ENSMUST00000082817 104 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm24871-201ENSMUST00000083099 116 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm23846-201ENSMUST00000083835 107 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Rnu5g-201ENSMUST00000093721 116 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf2Q3UAW9 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm15385-201ENSMUST00000118725 667 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm7421-201ENSMUST00000119298 639 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm7365-201ENSMUST00000120877 639 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm14977-201ENSMUST00000121626 812 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm24960-201ENSMUST00000157923 90 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm28788-201ENSMUST00000189717 375 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm29558-201ENSMUST00000190134 375 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm37421-201ENSMUST00000193088 132 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm9134-201ENSMUST00000193186 551 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm19231-201ENSMUST00000193212 830 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm17935-201ENSMUST00000196649 772 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm43554-201ENSMUST00000199987 186 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm42926-201ENSMUST00000200496 697 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm44952-201ENSMUST00000204443 433 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm44820-201ENSMUST00000207420 396 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm21041-201ENSMUST00000214829 823 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Gm25682-201ENSMUST00000083942 164 ntBASIC4.79□□□□□ -1.64
Brf2Q3UAW9 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms