Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Nkx3-1P97436 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Nkx3-1P97436 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Nkx3-1P97436 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Nkx3-1P97436 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Nkx3-1P97436 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Nkx3-1P97436 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm11970-201ENSMUST00000116105 320 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm22488-201ENSMUST00000116811 127 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm14082-201ENSMUST00000118582 801 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm12332-201ENSMUST00000121397 922 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm22819-201ENSMUST00000157445 303 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm24751-201ENSMUST00000157844 102 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm26490-201ENSMUST00000157879 140 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm22940-201ENSMUST00000158560 155 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm22395-201ENSMUST00000177427 96 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Mir6960-201ENSMUST00000183449 61 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 CT009734.1-201ENSMUST00000227657 1687 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Nkx3-1P97436 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.08□□□□□ -1.76
Nkx3-1P97436 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm8129-201ENSMUST00000118230 213 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm12190-201ENSMUST00000120001 187 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm4134-201ENSMUST00000173244 563 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm20614-201ENSMUST00000177106 632 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm27834-201ENSMUST00000183427 125 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm27414-201ENSMUST00000185033 381 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm28615-201ENSMUST00000187527 482 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm37908-201ENSMUST00000195828 470 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm18258-201ENSMUST00000210413 542 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm23300-201ENSMUST00000082712 125 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm23464-201ENSMUST00000083145 147 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm25140-201ENSMUST00000083254 140 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.07□□□□□ -1.76
Nkx3-1P97436 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Nkx3-1P97436 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Snord66-201ENSMUST00000104051 75 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm22493-201ENSMUST00000104494 132 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm14854-201ENSMUST00000117758 841 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms