Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.24□□□□□ -1.41
Sox1P53783 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox1P53783 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox1P53783 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox1P53783 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sox1P53783 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.23□□□□□ -1.41
Sox1P53783 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sox1P53783 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.23□□□□□ -1.41
Sox1P53783 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox1P53783 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox1P53783 Gm24125-201ENSMUST00000104105 137 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm13930-201ENSMUST00000118569 368 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm12878-201ENSMUST00000118744 332 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm13785-201ENSMUST00000119099 690 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm7421-201ENSMUST00000119298 639 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm15158-201ENSMUST00000120577 570 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm7365-201ENSMUST00000120877 639 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm14784-201ENSMUST00000121604 663 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm15335-201ENSMUST00000122442 411 ntBASIC6.23□□□□□ -1.41
Sox1P53783 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.23□□□□□ -1.41
Sox1P53783 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm22101-201ENSMUST00000157928 103 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm25944-201ENSMUST00000178758 94 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm37523-201ENSMUST00000194901 412 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Mir6375-201ENSMUST00000197176 95 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm43624-201ENSMUST00000197368 180 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm42961-201ENSMUST00000202023 181 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox1P53783 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Sox1P53783 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Sox1P53783 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sox1P53783 Olfr512-201ENSMUST00000074730 1056 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm24207-201ENSMUST00000082781 108 ntBASIC6.23□□□□□ -1.41
Sox1P53783 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.23□□□□□ -1.41
Sox1P53783 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox1P53783 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.23□□□□□ -1.41
Sox1P53783 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.23□□□□□ -1.41
Sox1P53783 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox1P53783 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox1P53783 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Sox1P53783 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox1P53783 Gm37761-201ENSMUST00000194989 2098 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Sox1P53783 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Sox1P53783 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox1P53783 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox1P53783 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox1P53783 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox1P53783 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.22□□□□□ -1.41
Sox1P53783 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Sox1P53783 Gm24469-201ENSMUST00000104487 131 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox1P53783 Gm11561-201ENSMUST00000117429 417 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm7927-201ENSMUST00000118818 880 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm11352-201ENSMUST00000119264 517 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm11366-201ENSMUST00000119279 429 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm13818-201ENSMUST00000119441 511 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm15044-201ENSMUST00000120703 598 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox1P53783 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox1P53783 Gm6081-201ENSMUST00000134472 489 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.22□□□□□ -1.41
Sox1P53783 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm25909-201ENSMUST00000157619 121 ntBASIC6.22□□□□□ -1.41
Sox1P53783 Gm23276-201ENSMUST00000157913 138 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms