Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm22952-201ENSMUST00000116720 120 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm13770-201ENSMUST00000117149 305 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm14267-201ENSMUST00000119751 496 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm22836-201ENSMUST00000158441 61 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm25348-201ENSMUST00000158961 111 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm18522-201ENSMUST00000173947 650 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC6.95□□□□□ -1.3
Rfx1P48377 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm28066-201ENSMUST00000188657 472 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm19694-201ENSMUST00000192364 505 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm38185-201ENSMUST00000193195 694 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm31211-201ENSMUST00000199170 253 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm43033-201ENSMUST00000199682 425 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Rfx1P48377 Gm24928-201ENSMUST00000083399 107 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm25897-201ENSMUST00000083709 107 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 AW046200-203ENSMUST00000211787 2479 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Rfx1P48377 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
Rfx1P48377 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Rfx1P48377 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Rfx1P48377 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Rfx1P48377 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm26340-201ENSMUST00000102365 99 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm22499-201ENSMUST00000104501 135 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm12641-201ENSMUST00000117874 985 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm14769-201ENSMUST00000118590 432 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Mup-ps22-201ENSMUST00000121611 243 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm14747-201ENSMUST00000149888 984 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm21999-201ENSMUST00000165985 387 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm24315-201ENSMUST00000177835 127 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm23568-201ENSMUST00000177960 92 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm24829-201ENSMUST00000179245 92 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm21232-201ENSMUST00000182187 1006 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm17929-201ENSMUST00000186851 627 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm28474-201ENSMUST00000188501 315 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm28802-201ENSMUST00000188624 944 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm19457-201ENSMUST00000200995 448 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm8479-201ENSMUST00000203825 718 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC6.94□□□□□ -1.3
Rfx1P48377 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm29809-201ENSMUST00000218423 493 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Gm19116-201ENSMUST00000218592 642 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Rfx1P48377 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.94□□□□□ -1.3
Rfx1P48377 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Rfx1P48377 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Rfx1P48377 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Rfx1P48377 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Rfx1P48377 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.94□□□□□ -1.3
Rfx1P48377 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Rfx1P48377 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms