Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cdx2P43241 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx2P43241 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Cdx2P43241 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx2P43241 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Cdx2P43241 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx2P43241 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Cdx2P43241 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx2P43241 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Cdx2P43241 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm22758-201ENSMUST00000102275 96 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm23178-201ENSMUST00000116782 95 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm26490-201ENSMUST00000157879 140 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm16125-201ENSMUST00000159003 339 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm17152-201ENSMUST00000172430 535 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm8919-201ENSMUST00000182028 1014 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm27760-201ENSMUST00000185048 114 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm32536-201ENSMUST00000205209 445 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Gm44820-201ENSMUST00000207420 396 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx2P43241 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.47□□□□□ -1.69
Cdx2P43241 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm6065-201ENSMUST00000081336 492 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Mir338-201ENSMUST00000083666 98 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm6043-201ENSMUST00000099961 492 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.47□□□□□ -1.69
Cdx2P43241 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx2P43241 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.46□□□□□ -1.69
Cdx2P43241 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.46□□□□□ -1.69
Cdx2P43241 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cdx2P43241 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cdx2P43241 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cdx2P43241 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx2P43241 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm13737-201ENSMUST00000119793 232 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm5942-201ENSMUST00000120046 439 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm14656-201ENSMUST00000120342 502 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm24239-201ENSMUST00000157791 255 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm22637-201ENSMUST00000158144 283 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm24944-201ENSMUST00000158330 128 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx2P43241 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm9443-201ENSMUST00000188406 816 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Gm3145-201ENSMUST00000188584 220 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm45343-201ENSMUST00000210452 828 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx2P43241 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx2P43241 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx2P43241 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx2P43241 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx2P43241 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.46□□□□□ -1.7
Cdx2P43241 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx2P43241 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx2P43241 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdx2P43241 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx2P43241 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx2P43241 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Cdx2P43241 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx2P43241 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Cdx2P43241 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx2P43241 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx2P43241 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms