Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm9836-201ENSMUST00000117132 216 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm12252-201ENSMUST00000119517 219 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm30280-201ENSMUST00000192214 262 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm42830-201ENSMUST00000196642 313 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm18462-201ENSMUST00000208112 417 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Mir383-201ENSMUST00000083523 70 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col2a1P28481 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col2a1P28481 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.17□□□□□ -1.58
Col2a1P28481 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.17□□□□□ -1.58
Col2a1P28481 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col2a1P28481 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col2a1P28481 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm12427-201ENSMUST00000117719 302 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm11698-201ENSMUST00000117948 455 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm8129-201ENSMUST00000118230 213 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm11510-201ENSMUST00000120278 347 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm23789-201ENSMUST00000122536 301 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm43370-201ENSMUST00000196437 284 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm4045-201ENSMUST00000204076 310 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.16□□□□□ -1.58
Col2a1P28481 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.16□□□□□ -1.58
Col2a1P28481 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col2a1P28481 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col2a1P28481 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Col2a1P28481 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col2a1P28481 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Col2a1P28481 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col2a1P28481 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Col2a1P28481 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col2a1P28481 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col2a1P28481 Gm13550-201ENSMUST00000118185 525 ntBASIC5.15□□□□□ -1.58
Col2a1P28481 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.15□□□□□ -1.58
Col2a1P28481 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.15□□□□□ -1.58
Col2a1P28481 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col2a1P28481 Gm6214-201ENSMUST00000178845 541 ntBASIC5.15□□□□□ -1.58
Col2a1P28481 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.15□□□□□ -1.58
Col2a1P28481 Mir6414-201ENSMUST00000183685 82 ntBASIC5.15□□□□□ -1.58
Col2a1P28481 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col2a1P28481 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col2a1P28481 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col2a1P28481 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.15□□□□□ -1.58
Col2a1P28481 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col2a1P28481 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.15□□□□□ -1.58
Col2a1P28481 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.15□□□□□ -1.59
Col2a1P28481 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.15□□□□□ -1.59
Col2a1P28481 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.15□□□□□ -1.59
Col2a1P28481 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col2a1P28481 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
Col2a1P28481 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col2a1P28481 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms