Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sdc1P18828 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm43843-201ENSMUST00000202396 1587 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Sdc1P18828 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm14304-201ENSMUST00000117272 446 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm12062-201ENSMUST00000117533 259 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm12571-201ENSMUST00000118132 243 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm16106-201ENSMUST00000119187 294 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm14714-201ENSMUST00000119743 439 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm11759-201ENSMUST00000121742 464 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm11197-201ENSMUST00000145158 839 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm22223-201ENSMUST00000157360 125 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm16545-201ENSMUST00000161968 463 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm10784-201ENSMUST00000178715 238 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm8321-201ENSMUST00000181691 980 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm27457-201ENSMUST00000184771 156 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Mir6952-201ENSMUST00000185092 61 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm28097-201ENSMUST00000187333 366 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC3.82□□□□□ -1.8
Sdc1P18828 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC3.82□□□□□ -1.8
Sdc1P18828 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm43580-201ENSMUST00000202892 284 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm44281-201ENSMUST00000203090 166 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm2522-201ENSMUST00000204280 322 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm45701-201ENSMUST00000212049 235 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 AC133203.1-201ENSMUST00000228241 301 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sdc1P18828 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sdc1P18828 Mir202-201ENSMUST00000083568 72 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.82□□□□□ -1.8
Sdc1P18828 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sdc1P18828 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sdc1P18828 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sdc1P18828 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Sdc1P18828 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 AC153959.1-201ENSMUST00000213617 1694 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms