Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm11196-201ENSMUST00000119052 395 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm12757-201ENSMUST00000119465 800 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm15428-201ENSMUST00000121352 333 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm12685-201ENSMUST00000121702 214 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm13232-201ENSMUST00000121816 632 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdx1P18111 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm22804-201ENSMUST00000158052 101 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm22730-201ENSMUST00000158085 171 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Mir1963-201ENSMUST00000158594 59 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm5263-201ENSMUST00000163646 601 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm26318-201ENSMUST00000176507 96 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm17981-201ENSMUST00000191109 739 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdx1P18111 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm43440-201ENSMUST00000201957 729 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm2011-203ENSMUST00000203750 435 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm44184-201ENSMUST00000204290 132 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm43892-201ENSMUST00000204373 265 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm44879-201ENSMUST00000207007 503 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm45367-201ENSMUST00000210171 347 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdx1P18111 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdx1P18111 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdx1P18111 Mir338-201ENSMUST00000083666 98 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Cdx1P18111 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdx1P18111 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdx1P18111 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdx1P18111 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdx1P18111 Fus-202ENSMUST00000079045 2623 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cdx1P18111 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm15148-201ENSMUST00000117602 156 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm11550-201ENSMUST00000118210 699 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm12465-201ENSMUST00000118591 300 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm14560-201ENSMUST00000118672 375 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm11385-201ENSMUST00000121513 570 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm5699-201ENSMUST00000152491 723 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm24944-201ENSMUST00000158330 128 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm25606-201ENSMUST00000158363 95 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm4831-201ENSMUST00000174626 594 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm5946-201ENSMUST00000182340 970 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.03□□□□□ -1.76
Cdx1P18111 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm19280-201ENSMUST00000190191 205 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm28872-201ENSMUST00000191518 158 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm33952-201ENSMUST00000197795 408 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm43090-201ENSMUST00000202459 314 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
Cdx1P18111 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.03□□□□□ -1.76
Cdx1P18111 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.03□□□□□ -1.76
Cdx1P18111 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Gm19256-201ENSMUST00000218550 231 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Thoc7-209ENSMUST00000225325 765 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cdx1P18111 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.03□□□□□ -1.76
Cdx1P18111 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdx1P18111 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms