Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 AC130661.1-201ENSMUST00000218248 1680 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm7468-201ENSMUST00000203900 652 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm19196-201ENSMUST00000209258 357 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm28941-201ENSMUST00000185536 1017 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm8748-201ENSMUST00000211125 587 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a3E9PWQ3 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm11708-201ENSMUST00000119530 832 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm20549-201ENSMUST00000174804 429 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm6065-201ENSMUST00000081336 492 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm4557-201ENSMUST00000185826 907 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm8708-201ENSMUST00000188500 906 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm3565-201ENSMUST00000222670 609 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Mir101b-201ENSMUST00000083622 97 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm20796-201ENSMUST00000180355 5838 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm13502-201ENSMUST00000121574 684 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm29097-201ENSMUST00000190273 422 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a3E9PWQ3 Gm42727-201ENSMUST00000202446 2823 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm14560-201ENSMUST00000118672 375 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm26350-201ENSMUST00000157531 288 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm27781-201ENSMUST00000185185 92 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm37501-201ENSMUST00000192830 691 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.4□□□□□ -1.7
Col6a3E9PWQ3 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms