Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm3307-201ENSMUST00000176164 632 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm27036-201ENSMUST00000182465 980 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Mir6416-201ENSMUST00000183664 117 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm37837-201ENSMUST00000191743 604 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm18306-201ENSMUST00000207338 569 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm45498-201ENSMUST00000210346 283 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Krt88Q9CPR6 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm23692-201ENSMUST00000101881 160 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm13250-201ENSMUST00000117209 753 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 H3f3c-201ENSMUST00000119459 411 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm13902-201ENSMUST00000120168 605 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm24441-201ENSMUST00000157235 281 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm5139-201ENSMUST00000175943 249 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm37421-201ENSMUST00000193088 132 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm10292-202ENSMUST00000193165 585 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm5842-201ENSMUST00000195073 622 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm42720-201ENSMUST00000196813 300 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm42437-201ENSMUST00000197263 923 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm18325-201ENSMUST00000203228 835 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm18007-201ENSMUST00000205019 844 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 AV026068-231ENSMUST00000225862 482 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm23972-201ENSMUST00000083322 165 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Krt88Q9CPR6 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.23□□□□□ -1.73
Krt88Q9CPR6 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Krt88Q9CPR6 Mir1188-201ENSMUST00000116756 120 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms