Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm11484-201ENSMUST00000119808 338 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Scarna13-201ENSMUST00000158164 275 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm23115-201ENSMUST00000158480 108 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm22326-201ENSMUST00000158897 351 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm5946-201ENSMUST00000182340 970 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm18406-201ENSMUST00000185872 669 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm36986-201ENSMUST00000195320 353 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm42437-201ENSMUST00000197263 923 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm43717-201ENSMUST00000198684 310 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm7639-201ENSMUST00000212608 484 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC5.07□□□□□ -1.6
Msh4Q99MT2 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msh4Q99MT2 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msh4Q99MT2 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msh4Q99MT2 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.07□□□□□ -1.6
Msh4Q99MT2 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm11781-201ENSMUST00000118328 472 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm25981-201ENSMUST00000157921 295 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm25846-201ENSMUST00000158013 135 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm15795-201ENSMUST00000160969 553 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm8256-201ENSMUST00000169178 453 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm24080-201ENSMUST00000175178 232 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm5139-201ENSMUST00000175943 249 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm27025-201ENSMUST00000182392 942 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm36985-201ENSMUST00000195595 379 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm43368-201ENSMUST00000200638 409 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm45215-201ENSMUST00000206407 395 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Clec2j-201ENSMUST00000032517 515 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm23846-201ENSMUST00000083835 107 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.06□□□□□ -1.6
Msh4Q99MT2 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Msh4Q99MT2 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm22273-201ENSMUST00000104040 132 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Mir1188-201ENSMUST00000116756 120 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm13195-201ENSMUST00000117229 261 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms