Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ndc1Q8VCB1 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm11890-201ENSMUST00000119585 417 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm14998-201ENSMUST00000120502 495 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm13000-201ENSMUST00000120937 496 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm13162-201ENSMUST00000121481 454 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm15335-201ENSMUST00000122442 411 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm22867-201ENSMUST00000157499 109 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm23591-201ENSMUST00000157663 286 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm23280-201ENSMUST00000157905 139 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm24767-201ENSMUST00000158509 95 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm28640-201ENSMUST00000190918 550 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm43945-201ENSMUST00000203595 754 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm3189-201ENSMUST00000205595 832 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm8412-201ENSMUST00000077493 440 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm23623-201ENSMUST00000082461 107 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm24623-201ENSMUST00000082616 194 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.51□□□□□ -1.53
Ndc1Q8VCB1 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm12293-201ENSMUST00000121898 590 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm23883-201ENSMUST00000122686 290 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm25826-201ENSMUST00000157090 137 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm22492-201ENSMUST00000157192 297 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm25667-201ENSMUST00000157701 275 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm17030-201ENSMUST00000167016 393 ntBASIC5.5□□□□□ -1.53
Ndc1Q8VCB1 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms