Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm14930-201ENSMUST00000118864 652 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm13359-201ENSMUST00000119000 695 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm12807-201ENSMUST00000121546 962 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm25293-201ENSMUST00000122792 285 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm25413-201ENSMUST00000158544 312 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm23387-201ENSMUST00000158586 107 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm22116-201ENSMUST00000158791 141 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm18416-201ENSMUST00000175635 1003 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Mir7031-201ENSMUST00000183860 65 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm38213-201ENSMUST00000193203 173 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm37445-201ENSMUST00000195318 242 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm18748-201ENSMUST00000198507 622 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm17775-201ENSMUST00000198542 258 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm44003-201ENSMUST00000203024 490 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm45215-201ENSMUST00000206407 395 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm20948-201ENSMUST00000211091 449 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm18585-201ENSMUST00000215197 556 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm272-201ENSMUST00000222073 919 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Snord15b-201ENSMUST00000083032 145 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Mir342-201ENSMUST00000083502 99 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm3563-201ENSMUST00000172963 1628 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Smc5-206ENSMUST00000226111 3265 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm13731-201ENSMUST00000117332 196 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm23964-201ENSMUST00000157966 107 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Scarna13-201ENSMUST00000158164 275 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm27820-201ENSMUST00000183628 175 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm37866-201ENSMUST00000191950 696 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Mir409-201ENSMUST00000198153 79 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm44307-201ENSMUST00000204466 764 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm18127-201ENSMUST00000208479 725 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm6841-201ENSMUST00000220602 598 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 AC132918.1-201ENSMUST00000227877 925 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm23448-201ENSMUST00000083151 104 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Mir17-201ENSMUST00000083574 84 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms