Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm16383-201ENSMUST00000118122 232 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm12090-201ENSMUST00000118692 758 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm11313-201ENSMUST00000118779 432 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm11891-201ENSMUST00000121241 619 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm23111-201ENSMUST00000122652 105 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm22895-201ENSMUST00000157508 308 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm23965-201ENSMUST00000157969 142 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm18397-201ENSMUST00000176704 587 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm28017-201ENSMUST00000183434 126 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm34176-201ENSMUST00000192621 474 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm43848-201ENSMUST00000198060 1247 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm44212-201ENSMUST00000205016 897 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm4012-201ENSMUST00000221504 581 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm22578-201ENSMUST00000083730 107 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm22864-201ENSMUST00000083950 130 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.62□□□□□ -1.51
Trim9Q8C7M3 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm12245-201ENSMUST00000117266 357 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm15357-201ENSMUST00000119160 285 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm13484-201ENSMUST00000120738 412 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm14065-201ENSMUST00000120848 585 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm12650-201ENSMUST00000121966 258 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm26731-201ENSMUST00000180683 543 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm8614-201ENSMUST00000182528 978 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm28467-201ENSMUST00000190981 318 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm9442-201ENSMUST00000194242 319 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Gm18924-201ENSMUST00000211929 316 ntBASIC5.61□□□□□ -1.51
Trim9Q8C7M3 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms