Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm43990-201ENSMUST00000203790 1691 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm14750-201ENSMUST00000118262 516 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm22958-201ENSMUST00000122512 184 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm27896-201ENSMUST00000175162 317 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm29196-201ENSMUST00000189239 618 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm8823-201ENSMUST00000193158 433 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm43005-201ENSMUST00000199015 648 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Synpr-207ENSMUST00000223583 3362 ntBASIC6.39□□□□□ -1.39
Usp47Q8BY87 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp47Q8BY87 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm13737-201ENSMUST00000119793 232 ntBASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm37601-201ENSMUST00000194922 394 ntBASIC6.38□□□□□ -1.39
Usp47Q8BY87 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm31931-201ENSMUST00000219666 222 ntBASIC6.38□□□□□ -1.39
Usp47Q8BY87 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp47Q8BY87 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm14067-201ENSMUST00000119340 314 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm7363-201ENSMUST00000119883 399 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm14037-201ENSMUST00000120576 313 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm22367-201ENSMUST00000178930 132 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm21070-201ENSMUST00000182425 985 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm19131-201ENSMUST00000203408 789 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm25134-201ENSMUST00000082646 160 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 n-R5s7-201ENSMUST00000083755 121 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.37□□□□□ -1.39
Usp47Q8BY87 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp47Q8BY87 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp47Q8BY87 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm44027-201ENSMUST00000203419 3480 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm9308-201ENSMUST00000119073 448 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Mir3620-201ENSMUST00000184710 61 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm20239-201ENSMUST00000196610 982 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm18877-201ENSMUST00000207706 539 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.36□□□□□ -1.39
Usp47Q8BY87 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp47Q8BY87 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms