Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm13367-201ENSMUST00000119955 796 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm25278-201ENSMUST00000157267 120 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm22693-201ENSMUST00000175049 442 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm27492-201ENSMUST00000185194 187 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm5268-201ENSMUST00000189212 940 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm8458-201ENSMUST00000196658 819 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm18268-201ENSMUST00000208445 943 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm19196-201ENSMUST00000209258 357 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 AC109180.1-201ENSMUST00000218676 398 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm17915-201ENSMUST00000222077 548 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 AC139758.1-201ENSMUST00000226573 930 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 AC158955.1-201ENSMUST00000227140 385 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 AC154239.1-201ENSMUST00000228565 406 ntBASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Ddx55Q6ZPL9 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm24125-201ENSMUST00000104105 137 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Mir466f-3-201ENSMUST00000104788 94 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm8145-201ENSMUST00000118220 745 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm12041-201ENSMUST00000121606 602 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm19807-201ENSMUST00000173971 667 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm27755-201ENSMUST00000184623 132 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm37578-201ENSMUST00000192256 1177 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 AC154484.1-201ENSMUST00000227311 771 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.99□□□□□ -1.45
Ddx55Q6ZPL9 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm14103-201ENSMUST00000119075 366 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm12237-201ENSMUST00000120158 470 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm15885-201ENSMUST00000122114 388 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm23205-201ENSMUST00000158671 103 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm16589-201ENSMUST00000159522 918 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm17655-201ENSMUST00000167969 255 ntBASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.98□□□□□ -1.45
Ddx55Q6ZPL9 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms