Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm14125-201ENSMUST00000113442 680 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm14513-201ENSMUST00000117403 123 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm12242-201ENSMUST00000118824 738 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm13475-201ENSMUST00000119290 234 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm14815-201ENSMUST00000120060 488 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm15316-201ENSMUST00000121082 421 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm6081-201ENSMUST00000134472 489 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm25969-201ENSMUST00000157166 132 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm24781-201ENSMUST00000157636 117 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm20656-201ENSMUST00000176925 518 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm23141-201ENSMUST00000178682 94 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm22951-201ENSMUST00000179471 107 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm28390-201ENSMUST00000185212 700 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm9114-201ENSMUST00000188558 997 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm28973-201ENSMUST00000189310 613 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm2367-201ENSMUST00000192374 472 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm42475-201ENSMUST00000201212 295 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm5027-201ENSMUST00000206700 375 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm18488-201ENSMUST00000215082 364 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm23627-201ENSMUST00000082459 107 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm22502-201ENSMUST00000082488 107 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm24149-201ENSMUST00000082757 107 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm24451-201ENSMUST00000083353 133 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Shisa3Q3UPR0 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shisa3Q3UPR0 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms