Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Col2a1P28481 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col2a1P28481 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm13567-201ENSMUST00000118026 247 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm24745-201ENSMUST00000157840 85 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Mir7669-201ENSMUST00000183442 58 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.2□□□□□ -1.58
Col2a1P28481 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col2a1P28481 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Snord22-201ENSMUST00000083153 126 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col2a1P28481 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col2a1P28481 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col2a1P28481 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col2a1P28481 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col2a1P28481 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col2a1P28481 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col2a1P28481 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col2a1P28481 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col2a1P28481 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Col2a1P28481 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.19□□□□□ -1.58
Col2a1P28481 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.19□□□□□ -1.58
Col2a1P28481 Gm45458-201ENSMUST00000209900 522 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 Gm17779-201ENSMUST00000213395 394 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.19□□□□□ -1.58
Col2a1P28481 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.19□□□□□ -1.58
Col2a1P28481 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Col2a1P28481 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col2a1P28481 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col2a1P28481 Gm42478-201ENSMUST00000199252 1467 ntBASIC5.19□□□□□ -1.58
Col2a1P28481 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.18□□□□□ -1.58
Col2a1P28481 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm22501-201ENSMUST00000158981 127 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Mir7047-201ENSMUST00000184595 64 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm29228-201ENSMUST00000185489 418 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm44463-201ENSMUST00000198895 137 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm43005-201ENSMUST00000199015 648 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm44002-201ENSMUST00000205134 594 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.18□□□□□ -1.58
Col2a1P28481 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.18□□□□□ -1.58
Col2a1P28481 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col2a1P28481 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.18□□□□□ -1.58
Col2a1P28481 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col2a1P28481 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms